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Issue:ISSN 1000-7083
          CN 51-1193/Q
Director:Sichuan Association for Science and Technology
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Your Position :Home->Past Journals Catalog->2021 Vol.40 No.1

MHC Genotyping for Captive Giant Pandas by PCR Sequencing
Author of the article:ZHU Ying1, LI Yudong1, HE Ming2, HU Lan2, WU Honglin2*
Author's Workplace:1. Sichuan Provincial Academy of Natural Resource Sciences, Chengdu 610015, China;
2. China Conservation and Research Center for the Giant Panda, Dujiangyan, Sichuan Province 611800, China
Key Words:giant panda; MHC gene; genetic management; PCR sequencing
Abstract:Major histocompatibility complex (MHC) genes provide important genetic parameters for captive management of endangered animals. We constructed MHC genotyping by PCR sequencing and evaluated genetic variation using 3 MHC class Ⅰ genes (Aime-C, Aime-I and Aime-L) and 4 MHC class Ⅱ genes (Aime-DQA1, Aime-DQA2, Aime-DQB1 and Aime-DRB3) by PCR sequencing for 91 giant pandas from China Conservation and Research Center for the Giant Panda. We found 22 MHC class Ⅰ alleles and 23 MHC class Ⅱ alleles, including 3 new alleles and named them Aime-I*08, Aime-L*08 and Aime-L*09, respectively. The Aime-L*08 shows 99.8% similarity to Aime-L*02 (1 base difference) and Aime-L*09 shows 99.6% similarity to Aime-L*04 (2 bases difference). The current method does not require polyacrylamide electrophoresis and silver staining, but only PCR amplification, and could be used for long-fragment genotyping. Therefore, it could be wildly used in panda breeding centers for MHC genotyping. This study provides important method for captive genetic management in giant panda.
2021,40(1): 46-52 收稿日期:2020-04-26
分类号:Q38;Q959.838
基金项目:濒危动物保育关键技术及科普旅游示范项目(四川省科学技术厅省院省校科技合作研发项目:2018JZ0009);大熊猫保育关键技术应用示范项目(峨眉山市科技局重点项目)
作者简介:朱英,女,博士,副研究员,动物保护遗传学和分子生态学,E-mail:so_zy2003@126.com
*通信作者:吴虹林,E-mail:wolong_whl@163.com
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